Bacteroides sp. AF39-16AC

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides sp. AF39-16AC is a rod-shaped bacterium characterized by the presence of flagella, which may contribute to its motility. This species contains a single replicon, indicating a streamlined genetic organization that could influence its adaptability in various environments. The accession number for Bacteroides sp. AF39-16AC is QTLN00000000.1, which provides a reference point for researchers seeking genomic information about this organism. Bacteroides species are known for their role in the human gut microbiome, where they contribute to the digestion of complex carbohydrates and play a part in maintaining gut health. The presence of flagella in Bacteroides sp. AF39-16AC may allow for enhanced mobility within the microbial community, potentially enabling it to access nutrients more effectively or evade unfavorable conditions. This trait could facilitate its survival in the diverse environments of the gastrointestinal tract, where competition for resources is intense. In summary, Bacteroides sp. AF39-16AC exhibits key traits such as its rod shape, flagella, and a single replicon, which collectively suggest a well-adapted organism capable of thriving in complex microbial ecosystems. Its potential role in nutrient metabolism and interaction within the gut microbiome underscores the ecological importance of Bacteroides species in maintaining host health and microbial diversity.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides sp. AF39-16AC
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides sp. AF39-16AC AF39-16AC.Scaf83, whole genome shotgun

Gene Summary

Adenine Count

1310604 bp

Thymine Count

1332302 bp

Guanine Count

1153963 bp

Cytosine Count

1120306 bp

Genome Length

4917973 bp

Protein-coding Genes

3951 genes

Non-Coding Genes

79 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
site-specific tyrosine recombinase xerdDW039_07400Not AvailableNegative1860811 - 186176436525.1
type ii 3-dehydroquinate dehydrataseDW039_07405Not AvailablePositive1861883 - 186230215507.7
pyruvate kinaseDW039_07410Not AvailablePositive1862323 - 186378053999.4
methyltransferaseDW039_07415Not AvailablePositive1863899 - 186452824250.2
abc transporter permeaseDW039_07420Not AvailableNegative1864538 - 186577346072.4
30s ribosome-binding factor rbfaDW039_07425Not AvailableNegative1865773 - 186610512738.7
hypothetical proteinDW039_07430Not AvailableNegative1866800 - 186931092997.0
5'-methylthioadenosine/adenosylhomocysteine nucleosidaseDW039_07435Not AvailablePositive1869555 - 187025925418.1
s-ribosylhomocysteine lyaseDW039_07440Not AvailablePositive1870291 - 187078218929.8
amp-binding proteinDW039_07445Not AvailableNegative1870879 - 187252862294.2

Displaying genes 1451 – 1460 of 4030 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.