Bacteroides sp. AF39-16AC

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides sp. AF39-16AC is a rod-shaped bacterium characterized by the presence of flagella, which may contribute to its motility. This species contains a single replicon, indicating a streamlined genetic organization that could influence its adaptability in various environments. The accession number for Bacteroides sp. AF39-16AC is QTLN00000000.1, which provides a reference point for researchers seeking genomic information about this organism. Bacteroides species are known for their role in the human gut microbiome, where they contribute to the digestion of complex carbohydrates and play a part in maintaining gut health. The presence of flagella in Bacteroides sp. AF39-16AC may allow for enhanced mobility within the microbial community, potentially enabling it to access nutrients more effectively or evade unfavorable conditions. This trait could facilitate its survival in the diverse environments of the gastrointestinal tract, where competition for resources is intense. In summary, Bacteroides sp. AF39-16AC exhibits key traits such as its rod shape, flagella, and a single replicon, which collectively suggest a well-adapted organism capable of thriving in complex microbial ecosystems. Its potential role in nutrient metabolism and interaction within the gut microbiome underscores the ecological importance of Bacteroides species in maintaining host health and microbial diversity.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides sp. AF39-16AC
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides sp. AF39-16AC AF39-16AC.Scaf83, whole genome shotgun

Gene Summary

Adenine Count

1310604 bp

Thymine Count

1332302 bp

Guanine Count

1153963 bp

Cytosine Count

1120306 bp

Genome Length

4917973 bp

Protein-coding Genes

3951 genes

Non-Coding Genes

79 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rna polymerase sigma factorDW039_07100Not AvailablePositive1773800 - 177430319891.7
glycoside hydrolase family 125 proteinDW039_07105Not AvailablePositive1774430 - 177589355622.1
hypothetical proteinDW039_07110Not AvailableNegative1776077 - 17763168943.02
transcriptional regulator mrazDW039_07115Not AvailablePositive1776415 - 177689118308.0
16s rrna (cytosine(1402)-n(4))-methyltransferase rsmhDW039_07120Not AvailablePositive1776902 - 177782235006.0
hypothetical proteinDW039_07125Not AvailablePositive1777832 - 177818213700.7
pasta domain-containing proteinDW039_07130Not AvailablePositive1778270 - 178040878942.1
udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligaseDW039_07135Not AvailablePositive1780454 - 178190253024.9
phospho-n-acetylmuramoyl-pentapeptide- transferaseDW039_07140Not AvailablePositive1782025 - 178329346873.6
udp-n-acetylmuramoyl-l-alanine--d-glutamate ligaseDW039_07145Not AvailablePositive1783399 - 178473349146.6

Displaying genes 1391 – 1400 of 4030 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.