Chitinophaga silvisoli strain K20C18050901

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Chitinophagia

Order

Chitinophagales

Family

Chitinophagaceae

Genus

Chitinophaga

Description

Chitinophaga silvisoli strain K20C18050901 is a Gram-negative, rod-shaped bacterium characterized by a single replicon. This strain is cataloged under the accession number QTJV00000000.1, which provides a reference for its genetic information. As a member of the genus Chitinophaga, this bacterium is likely associated with the decomposition of chitin, a natural polymer found in the exoskeletons of arthropods and fungal cell walls. Members of this genus are often found in soil and decaying organic matter, contributing to nutrient cycling and soil health. The ability to degrade chitin can play a significant role in the breakdown of organic materials, aiding in the recycling of nutrients in ecosystems. The ecological significance of Chitinophaga silvisoli strain K20C18050901 lies in its potential contribution to the decomposition processes in its habitat. By breaking down chitinous materials, this bacterium may facilitate the availability of nutrients for other organisms, thus supporting biodiversity and ecosystem functioning.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassChitinophagia
OrderChitinophagales
FamilyChitinophagaceae
GenusChitinophaga
SpeciesChitinophaga silvisoli
Strainstrain K20C18050901

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chitinophaga silvisoli strain K20C18050901 contig75, whole genome

Gene Summary

Adenine Count

2315018 bp

Thymine Count

2305013 bp

Guanine Count

1870880 bp

Cytosine Count

1864525 bp

Genome Length

8355436 bp

Protein-coding Genes

6777 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ragb/susd family nutrient uptake outer membrane proteinDXN04_18395Not AvailableNegative4537870 - 453934255132.2
tonb-dependent receptorDXN04_18400Not AvailableNegative4539354 - 4542470114617.0
hypothetical proteinDXN04_18405Not AvailableNegative4542766 - 4547037158852.0
glycoside hydrolase family 31 proteinDXN04_18410Not AvailableNegative4547039 - 454936387626.8
response regulatorDXN04_18415Not AvailablePositive4549585 - 4553880160804.0
hypothetical proteinDXN04_18420Not AvailableNegative4553997 - 455437113664.4
t9ss c-terminal target domain-containing proteinDXN04_18425Not AvailableNegative4554418 - 455639770852.1
alpha/beta hydrolaseDXN04_18430Not AvailablePositive4556552 - 455735228552.0
pas domain-containing sensor histidine kinaseDXN04_18435Not AvailablePositive4557440 - 455866046415.8
response regulatorDXN04_18440Not AvailablePositive4558677 - 455973539741.7

Displaying genes 3661 – 3670 of 6844 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.