Chitinophaga silvisoli strain K20C18050901

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Chitinophagia

Order

Chitinophagales

Family

Chitinophagaceae

Genus

Chitinophaga

Description

Chitinophaga silvisoli strain K20C18050901 is a Gram-negative, rod-shaped bacterium characterized by a single replicon. This strain is cataloged under the accession number QTJV00000000.1, which provides a reference for its genetic information. As a member of the genus Chitinophaga, this bacterium is likely associated with the decomposition of chitin, a natural polymer found in the exoskeletons of arthropods and fungal cell walls. Members of this genus are often found in soil and decaying organic matter, contributing to nutrient cycling and soil health. The ability to degrade chitin can play a significant role in the breakdown of organic materials, aiding in the recycling of nutrients in ecosystems. The ecological significance of Chitinophaga silvisoli strain K20C18050901 lies in its potential contribution to the decomposition processes in its habitat. By breaking down chitinous materials, this bacterium may facilitate the availability of nutrients for other organisms, thus supporting biodiversity and ecosystem functioning.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassChitinophagia
OrderChitinophagales
FamilyChitinophagaceae
GenusChitinophaga
SpeciesChitinophaga silvisoli
Strainstrain K20C18050901

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chitinophaga silvisoli strain K20C18050901 contig75, whole genome

Gene Summary

Adenine Count

2315018 bp

Thymine Count

2305013 bp

Guanine Count

1870880 bp

Cytosine Count

1864525 bp

Genome Length

8355436 bp

Protein-coding Genes

6777 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
quinone-dependent dihydroorotate dehydrogenaseDXN04_14925Not AvailablePositive3581768 - 358279037056.3
abi family proteinDXN04_14930Not AvailableNegative3583052 - 358396335824.4
glycoside hydrolase family 127 proteinDXN04_14935Not AvailableNegative3584147 - 358613874564.0
ragb/susd family nutrient uptake outer membrane proteinDXN04_14940Not AvailableNegative3586192 - 358780260547.3
tonb-dependent receptorDXN04_14945Not AvailableNegative3587814 - 3591122123218.0
duf4974 domain-containing proteinDXN04_14950Not AvailableNegative3591299 - 359233939208.1
rna polymerase subunit sigma-24DXN04_14955Not AvailableNegative3592372 - 359295322543.4
16s rrna (uracil(1498)-n(3))-methyltransferaseDXN04_14960Not AvailableNegative3593026 - 359372725702.2
doxx family proteinDXN04_14965Not AvailablePositive3593899 - 359427914179.6
class a beta-lactamaseDXN04_14970Not AvailablePositive3594289 - 359517032209.6

Displaying genes 2971 – 2980 of 6844 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.