Chitinophaga silvisoli strain K20C18050901

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Chitinophagia

Order

Chitinophagales

Family

Chitinophagaceae

Genus

Chitinophaga

Description

Chitinophaga silvisoli strain K20C18050901 is a Gram-negative, rod-shaped bacterium characterized by a single replicon. This strain is cataloged under the accession number QTJV00000000.1, which provides a reference for its genetic information. As a member of the genus Chitinophaga, this bacterium is likely associated with the decomposition of chitin, a natural polymer found in the exoskeletons of arthropods and fungal cell walls. Members of this genus are often found in soil and decaying organic matter, contributing to nutrient cycling and soil health. The ability to degrade chitin can play a significant role in the breakdown of organic materials, aiding in the recycling of nutrients in ecosystems. The ecological significance of Chitinophaga silvisoli strain K20C18050901 lies in its potential contribution to the decomposition processes in its habitat. By breaking down chitinous materials, this bacterium may facilitate the availability of nutrients for other organisms, thus supporting biodiversity and ecosystem functioning.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassChitinophagia
OrderChitinophagales
FamilyChitinophagaceae
GenusChitinophaga
SpeciesChitinophaga silvisoli
Strainstrain K20C18050901

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chitinophaga silvisoli strain K20C18050901 contig75, whole genome

Gene Summary

Adenine Count

2315018 bp

Thymine Count

2305013 bp

Guanine Count

1870880 bp

Cytosine Count

1864525 bp

Genome Length

8355436 bp

Protein-coding Genes

6777 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
stld/darb family beta-ketosynthaseDXN04_12910Not AvailableNegative3079463 - 308059942428.0
dialkylrecorsinol condensing enzymeDXN04_12915Not AvailableNegative3080872 - 308179234391.4
class i sam-dependent methyltransferaseDXN04_12920Not AvailableNegative3082032 - 308270625125.5
duf2807 domain-containing proteinDXN04_12925Not AvailableNegative3082706 - 308342525105.4
glutamine-hydrolyzing gmp synthaseDXN04_12930Not AvailablePositive3083524 - 308506256787.8
amino acid abc transporter substrate-binding proteinDXN04_12935Not AvailablePositive3085198 - 308648748617.1
ligase-associated dna damage response exonucleaseDXN04_12940Not AvailablePositive3086556 - 308756337475.3
atp-dependent dna ligaseDXN04_12945Not AvailablePositive3087560 - 308915260844.8
lrp/asnc family transcriptional regulatorDXN04_12950Not AvailablePositive3089216 - 308971918831.1
ld-carboxypeptidaseDXN04_12955Not AvailablePositive3089909 - 309094037844.6

Displaying genes 2571 – 2580 of 6844 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.