Chitinophaga silvisoli strain K20C18050901

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Chitinophagia

Order

Chitinophagales

Family

Chitinophagaceae

Genus

Chitinophaga

Description

Chitinophaga silvisoli strain K20C18050901 is a Gram-negative, rod-shaped bacterium characterized by a single replicon. This strain is cataloged under the accession number QTJV00000000.1, which provides a reference for its genetic information. As a member of the genus Chitinophaga, this bacterium is likely associated with the decomposition of chitin, a natural polymer found in the exoskeletons of arthropods and fungal cell walls. Members of this genus are often found in soil and decaying organic matter, contributing to nutrient cycling and soil health. The ability to degrade chitin can play a significant role in the breakdown of organic materials, aiding in the recycling of nutrients in ecosystems. The ecological significance of Chitinophaga silvisoli strain K20C18050901 lies in its potential contribution to the decomposition processes in its habitat. By breaking down chitinous materials, this bacterium may facilitate the availability of nutrients for other organisms, thus supporting biodiversity and ecosystem functioning.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassChitinophagia
OrderChitinophagales
FamilyChitinophagaceae
GenusChitinophaga
SpeciesChitinophaga silvisoli
Strainstrain K20C18050901

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chitinophaga silvisoli strain K20C18050901 contig75, whole genome

Gene Summary

Adenine Count

2315018 bp

Thymine Count

2305013 bp

Guanine Count

1870880 bp

Cytosine Count

1864525 bp

Genome Length

8355436 bp

Protein-coding Genes

6777 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
methylmalonyl-coa epimeraseDXN04_06875Not AvailableNegative1682909 - 168331014729.9
iscs subfamily cysteine desulfuraseDXN04_06880Not AvailablePositive1683410 - 168462444119.9
fe-s cluster assembly scaffold iscuDXN04_06885Not AvailablePositive1684724 - 168516416513.3
gliding motility-associated abc transporter permease subunit gldfDXN04_06890Not AvailablePositive1685380 - 168611427396.9
gliding motility-associated abc transporter substrate-binding protein gldgDXN04_06895Not AvailablePositive1686138 - 168785364749.5
bifunctional udp-n-acetylmuramoyl-tripeptide:d-alanyl-d-alanine ligase/alanine racemaseDXN04_06900Not AvailablePositive1688075 - 169057994204.0
lipoprotein signal peptidaseDXN04_06905Not AvailablePositive1690633 - 169128924701.6
tonb-dependent receptorDXN04_06910Not AvailablePositive1691514 - 1694387106506.0
sulfite exporter taue/safe family proteinDXN04_06915Not AvailablePositive1694585 - 169555934525.2
class ii fumarate hydrataseDXN04_06920Not AvailableNegative1695637 - 169703750423.7

Displaying genes 1371 – 1380 of 6844 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.