Deminuibacter soli strain K23C18032701

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Chitinophagia

Order

Chitinophagales

Family

Chitinophagaceae

Genus

Deminuibacter

Description

Deminuibacter soli strain K23C18032701 is a notable bacterium characterized by a single replicon, indicating a streamlined genetic organization. The strain's genomic data is encapsulated in the accession QTJU00000000.1, which serves as a reference for further studies and analyses. The limited number of replicons suggests that Deminuibacter soli may have a relatively simple genomic architecture compared to other bacterial species. This simplicity can be advantageous for understanding the organism's metabolic pathways and ecological roles. It may also indicate a specialization or adaptation to specific environmental niches. In the context of its ecological significance, the presence of Deminuibacter soli in soil environments highlights its potential role in soil microbiomes. Soil bacteria are crucial for nutrient cycling, organic matter decomposition, and maintaining soil health. The study of this strain could provide insights into its contributions to soil ecology, particularly in how it interacts with other microorganisms and influences soil properties. Overall, Deminuibacter soli strain K23C18032701 exemplifies a unique organism within the soil microbiome, with its single replicon serving as a key trait for researchers interested in microbial ecology and the functional dynamics of soil communities.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassChitinophagia
OrderChitinophagales
FamilyChitinophagaceae
GenusDeminuibacter
SpeciesDeminuibacter soli
Strainstrain K23C18032701

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Deminuibacter soli strain K23C18032701

Gene Summary

Adenine Count

1535946 bp

Thymine Count

1543694 bp

Guanine Count

1370081 bp

Cytosine Count

1384848 bp

Genome Length

5834569 bp

Protein-coding Genes

4790 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf3108 domain-containing proteinDXN05_02155Not AvailableNegative519453 - 52022929495.4
upf0104 family proteinDXN05_02160Not AvailableNegative520248 - 52129739443.0
crossover junction endodeoxyribonuclease ruvcDXN05_02165Not AvailablePositive521279 - 52184820916.6
hit family proteinDXN05_02170Not AvailableNegative521910 - 52230214608.8
transcription elongation factor greaDXN05_02175Not AvailableNegative522398 - 52287117095.8
hydroxyacid dehydrogenaseDXN05_02180Not AvailableNegative522996 - 52393134733.1
ribosomal rna small subunit methyltransferase aDXN05_02185Not AvailableNegative523941 - 52470828670.8
4-hydroxythreonine-4-phosphate dehydrogenase pdxaDXN05_02190Not AvailablePositive524853 - 52595040301.2
aldose 1-epimerase family proteinDXN05_02195Not AvailablePositive526026 - 52689532117.0
transcriptional regulatorDXN05_02200Not AvailableNegative527063 - 52735611075.4

Displaying genes 431 – 440 of 4844 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.