Deminuibacter soli strain K23C18032701

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Chitinophagia

Order

Chitinophagales

Family

Chitinophagaceae

Genus

Deminuibacter

Description

Deminuibacter soli strain K23C18032701 is a notable bacterium characterized by a single replicon, indicating a streamlined genetic organization. The strain's genomic data is encapsulated in the accession QTJU00000000.1, which serves as a reference for further studies and analyses. The limited number of replicons suggests that Deminuibacter soli may have a relatively simple genomic architecture compared to other bacterial species. This simplicity can be advantageous for understanding the organism's metabolic pathways and ecological roles. It may also indicate a specialization or adaptation to specific environmental niches. In the context of its ecological significance, the presence of Deminuibacter soli in soil environments highlights its potential role in soil microbiomes. Soil bacteria are crucial for nutrient cycling, organic matter decomposition, and maintaining soil health. The study of this strain could provide insights into its contributions to soil ecology, particularly in how it interacts with other microorganisms and influences soil properties. Overall, Deminuibacter soli strain K23C18032701 exemplifies a unique organism within the soil microbiome, with its single replicon serving as a key trait for researchers interested in microbial ecology and the functional dynamics of soil communities.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassChitinophagia
OrderChitinophagales
FamilyChitinophagaceae
GenusDeminuibacter
SpeciesDeminuibacter soli
Strainstrain K23C18032701

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Deminuibacter soli strain K23C18032701

Gene Summary

Adenine Count

1535946 bp

Thymine Count

1543694 bp

Guanine Count

1370081 bp

Cytosine Count

1384848 bp

Genome Length

5834569 bp

Protein-coding Genes

4790 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
deor/glpr transcriptional regulatorDXN05_16690Not AvailablePositive3884581 - 388532727492.7
susc/raga family tonb-linked outer membrane proteinDXN05_16695Not AvailablePositive3885681 - 3888806114701.0
susd/ragb family nutrient-binding outer membrane lipoproteinDXN05_16700Not AvailablePositive3888737 - 389047064183.4
duf4397 domain-containing proteinDXN05_16705Not AvailablePositive3890495 - 389130128667.6
tonb-dependent receptorDXN05_16710Not AvailablePositive3891608 - 3894895120501.0
ragb/susd family nutrient uptake outer membrane proteinDXN05_16715Not AvailablePositive3894927 - 389657661639.8
metallophosphoesteraseDXN05_16720Not AvailablePositive3896655 - 389849968006.8
hypothetical proteinDXN05_16725Not AvailableNegative3898757 - 389998944606.1
redox-regulated atpase ychfDXN05_16730Not AvailablePositive3900235 - 390133840435.7
upxy family transcription antiterminatorDXN05_16735Not AvailableNegative3901404 - 390194320813.2

Displaying genes 3301 – 3310 of 4844 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.