Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain OF05-11AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1543972 bp
Thymine Count
1504460 bp
Guanine Count
1141577 bp
Cytosine Count
1208714 bp
Genome Length
5398873 bp
Protein-coding Genes
4621 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| upf0104 family protein | DXA78_01640 | Not Available | Negative | 394149 - 395138 | 37048.7 |
| aspartate-alanine antiporter | DXA78_01645 | Not Available | Positive | 395270 - 396967 | 60555.0 |
| aspartate 4-decarboxylase | DXA78_01650 | Not Available | Positive | 397009 - 398655 | 62607.2 |
| pas domain-containing sensor histidine kinase | DXA78_01655 | Not Available | Negative | 398644 - 399936 | 48800.7 |
| sigma-54-dependent fis family transcriptional regulator | DXA78_01660 | Not Available | Negative | 399980 - 401329 | 50001.3 |
| tolc family protein | DXA78_01665 | Not Available | Negative | 401479 - 402951 | 55730.2 |
| hypothetical protein | DXA78_01670 | Not Available | Negative | 402967 - 403278 | 12076.0 |
| pas domain s-box protein | DXA78_01675 | Not Available | Negative | 403406 - 406018 | 98559.7 |
| abc transporter permease | DXA78_01680 | Not Available | Negative | 406114 - 407358 | 47889.0 |
| abc transporter permease | DXA78_01685 | Not Available | Negative | 407373 - 408671 | 47860.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



