Bacteroides fragilis strain OM04-9BH

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides fragilis strain OM04-9BH is a Gram-negative, rod-shaped bacterium that typically exists as single cells. This strain thrives optimally at 37.0°C, which aligns with the human body temperature, indicating its adaptation to a host-associated habitat. As a chemoorganotroph, B. fragilis strain OM04-9BH derives its energy from organic compounds, reflecting its ecological role in the gastrointestinal microbiota where it contributes to the degradation of complex carbohydrates and other organic materials. Characteristically, B. fragilis is an anaerobic organism, which means it grows in environments devoid of oxygen. This trait is particularly significant as it highlights the bacterium's ecological niche within the anaerobic conditions of the intestinal tract, where it plays a vital role in maintaining a balanced microbiome. The presence of B. fragilis strains such as OM04-9BH underscores the importance of anaerobic bacteria in gut health and the metabolic processes that contribute to nutrient absorption and overall host well-being. Understanding the specific traits of Bacteroides fragilis strain OM04-9BH can provide insights into its functional role in the host's microbiome, particularly in the metabolism of dietary fibers and the production of short-chain fatty acids, which are essential for maintaining intestinal health and influencing immune responses.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides fragilis
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Bacteroides fragilis strain OM04-9BH
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityHuman

Genome Summary

Bacteroides fragilis strain OM04-9BH

Accession NumberQSUS00000000.1

Gene Summary

Adenine Count

1549660 bp

Thymine Count

1533867 bp

Guanine Count

1177936 bp

Cytosine Count

1198233 bp

Genome Length

5459886 bp

Protein-coding Genes

4520 genes

Non-Coding Genes

89 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
pyridoxal phosphate-dependent aminotransferaseDXB57_00195Not Available+45416 - 4660045259.0
o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthaseDXB57_00200Not Available+46632 - 4786745402.2
sigma-70 family rna polymerase sigma factorDXB57_00205Not Available+47893 - 4847722930.8
duf4974 domain-containing proteinDXB57_00210Not Available+48587 - 4969342689.1
hypothetical proteinDXB57_00215Not Available+49884 - 5032717261.1
crp/fnr family transcriptional regulatorDXB57_00220Not Available-50350 - 5109329166.7
marc family proteinDXB57_00225Not Available+51209 - 5180521887.8
rhomboid family intramembrane serine proteaseDXB57_00230Not Available-51848 - 5254026053.8
4-alpha-glucanotransferaseDXB57_00235Not Available+52711 - 5465174877.2
glycosyltransferase family 1 proteinDXB57_00240Not Available+54666 - 5594048392.1

Displaying genes 71 – 80 of 4609 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites