Bacteroides fragilis strain OM04-9BH

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides fragilis strain OM04-9BH is a Gram-negative, rod-shaped bacterium that typically exists as single cells. This strain thrives optimally at 37.0°C, which aligns with the human body temperature, indicating its adaptation to a host-associated habitat. As a chemoorganotroph, B. fragilis strain OM04-9BH derives its energy from organic compounds, reflecting its ecological role in the gastrointestinal microbiota where it contributes to the degradation of complex carbohydrates and other organic materials. Characteristically, B. fragilis is an anaerobic organism, which means it grows in environments devoid of oxygen. This trait is particularly significant as it highlights the bacterium's ecological niche within the anaerobic conditions of the intestinal tract, where it plays a vital role in maintaining a balanced microbiome. The presence of B. fragilis strains such as OM04-9BH underscores the importance of anaerobic bacteria in gut health and the metabolic processes that contribute to nutrient absorption and overall host well-being. Understanding the specific traits of Bacteroides fragilis strain OM04-9BH can provide insights into its functional role in the host's microbiome, particularly in the metabolism of dietary fibers and the production of short-chain fatty acids, which are essential for maintaining intestinal health and influencing immune responses.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides fragilis
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Bacteroides fragilis strain OM04-9BH
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityHuman

Genome Summary

Bacteroides fragilis strain OM04-9BH

Accession NumberQSUS00000000.1

Gene Summary

Adenine Count

1549660 bp

Thymine Count

1533867 bp

Guanine Count

1177936 bp

Cytosine Count

1198233 bp

Genome Length

5459886 bp

Protein-coding Genes

4520 genes

Non-Coding Genes

89 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
lyttr family transcriptional regulatorDXB57_00145Not Available+33765 - 3460731240.1
signal peptidase iiDXB57_00150Not Available-34743 - 3529121543.1
tigr01212 family radical sam proteinDXB57_00155Not Available+35401 - 3633635755.0
fpra family a-type flavoproteinDXB57_00160Not Available+36450 - 3764945247.6
glucosamine-6-phosphate deaminaseDXB57_00165Not Available+37689 - 3850129896.7
hypothetical proteinDXB57_00170Not Available-38601 - 3902615783.8
threonylcarbamoyl-amp synthaseDXB57_00175Not Available-39091 - 3970523163.0
asma family proteinDXB57_00180Not Available-39715 - 4222892307.4
tetratricopeptide repeat proteinDXB57_00185Not Available-42458 - 4445875772.8
cof-type had-iib family hydrolaseDXB57_00190Not Available-44460 - 4524528581.3

Displaying genes 61 – 70 of 4609 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites