Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain OM04-9BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1549660 bp
Thymine Count
1533867 bp
Guanine Count
1177936 bp
Cytosine Count
1198233 bp
Genome Length
5459886 bp
Protein-coding Genes
4520 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protoporphyrinogen oxidase | DXB57_12570 | Not Available | Negative | 2859760 - 2861148 | 51229.9 |
| oxygen-independent coproporphyrinogen iii oxidase | DXB57_12575 | Not Available | Negative | 2861151 - 2862515 | 51633.0 |
| mfs transporter | DXB57_12580 | Not Available | Negative | 2862521 - 2863750 | 46002.1 |
| tonb-dependent receptor | DXB57_12585 | Not Available | Negative | 2863768 - 2865837 | 78322.9 |
| hypothetical protein | DXB57_12590 | Not Available | Positive | 2866468 - 2868786 | 84567.3 |
| ompa family protein | DXB57_12595 | Not Available | Positive | 2868799 - 2869998 | 46026.7 |
| helix-turn-helix domain-containing protein | DXB57_12600 | Not Available | Positive | 2870297 - 2871166 | 33956.0 |
| tonb-dependent receptor | DXB57_12610 | Not Available | Positive | 2871984 - 2874215 | 84055.9 |
| susc/raga family tonb-linked outer membrane protein | DXB57_12615 | Not Available | Positive | 2874260 - 2877637 | 126942.0 |
| ragb/susd family nutrient uptake outer membrane protein | DXB57_12620 | Not Available | Positive | 2877648 - 2879153 | 58375.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



