Bacteroides sp. OM05-12

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides sp. OM05-12 is characterized as a rod-shaped bacterium, indicating its elongated structure, which is common among members of the Bacteroides genus. This species possesses flagella, which are tail-like structures that provide motility, allowing the bacterium to navigate its environment effectively. Genetically, Bacteroides sp. OM05-12 has a single replicon, suggesting a streamlined genomic organization that may contribute to its adaptability and efficiency in various ecological niches. The genomic data for this bacterium is accessible under the accession number QSUN00000000.1, providing a resource for further genomic analysis and exploration of its biological functions. In terms of ecological significance, Bacteroides species are typically known to be part of the gut microbiota in humans and other animals. They play vital roles in the digestion of complex carbohydrates and the maintenance of gut health. The presence of flagella may enhance the bacterium's ability to colonize and thrive in the gastrointestinal tract, where motility can be advantageous for accessing nutrients and interacting with other microbial communities. Overall, Bacteroides sp. OM05-12 exemplifies the adaptive features of the Bacteroides genus, with its rod shape, motility, and genomic characteristics likely contributing to its ecological roles within microbial ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides sp. OM05-12
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides sp. OM05-12 OM05-12.Scaf64, whole genome shotgun

Gene Summary

Adenine Count

1363015 bp

Thymine Count

1344887 bp

Guanine Count

874440 bp

Cytosine Count

893253 bp

Genome Length

4475735 bp

Protein-coding Genes

3421 genes

Non-Coding Genes

79 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dipeptidaseDXB63_04360Not AvailablePositive1233272 - 123463050240.2
lysine--trna ligaseDXB63_04365Not AvailablePositive1235133 - 123686066261.1
nad(p)h-dependent glycerol-3-phosphate dehydrogenaseDXB63_04370Not AvailablePositive1236863 - 123785837377.4
glucose-6-phosphate isomeraseDXB63_04375Not AvailablePositive1237872 - 123921849665.5
t9ss c-terminal target domain-containing proteinDXB63_04380Not AvailableNegative1239321 - 1242479117991.0
hypothetical proteinDXB63_04385Not AvailablePositive1242642 - 124442369847.2
duf5035 domain-containing proteinDXB63_04390Not AvailableNegative1244428 - 124491317822.3
had family hydrolaseDXB63_04395Not AvailablePositive1245033 - 124576426972.2
helix-turn-helix domain-containing proteinDXB63_04400Not AvailableNegative1246195 - 124656013576.5
type ii toxin-antitoxin system higb family toxinDXB63_04405Not AvailableNegative1246565 - 124685811560.0

Displaying genes 891 – 900 of 3500 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.