Bacteroides sp. OM05-12

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides sp. OM05-12 is characterized as a rod-shaped bacterium, indicating its elongated structure, which is common among members of the Bacteroides genus. This species possesses flagella, which are tail-like structures that provide motility, allowing the bacterium to navigate its environment effectively. Genetically, Bacteroides sp. OM05-12 has a single replicon, suggesting a streamlined genomic organization that may contribute to its adaptability and efficiency in various ecological niches. The genomic data for this bacterium is accessible under the accession number QSUN00000000.1, providing a resource for further genomic analysis and exploration of its biological functions. In terms of ecological significance, Bacteroides species are typically known to be part of the gut microbiota in humans and other animals. They play vital roles in the digestion of complex carbohydrates and the maintenance of gut health. The presence of flagella may enhance the bacterium's ability to colonize and thrive in the gastrointestinal tract, where motility can be advantageous for accessing nutrients and interacting with other microbial communities. Overall, Bacteroides sp. OM05-12 exemplifies the adaptive features of the Bacteroides genus, with its rod shape, motility, and genomic characteristics likely contributing to its ecological roles within microbial ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides sp. OM05-12
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides sp. OM05-12 OM05-12.Scaf64, whole genome shotgun

Gene Summary

Adenine Count

1363015 bp

Thymine Count

1344887 bp

Guanine Count

874440 bp

Cytosine Count

893253 bp

Genome Length

4475735 bp

Protein-coding Genes

3421 genes

Non-Coding Genes

79 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
prephenate dehydrogenaseDXB63_09480Not AvailablePositive2542752 - 254352529326.4
1,4-dihydroxy-2-naphthoate octaprenyltransferaseDXB63_09485Not AvailablePositive2543527 - 254441432826.0
m6 family metalloprotease domain-containing proteinDXB63_09490Not AvailableNegative2544851 - 254737093913.5
threonine synthaseDXB63_09495Not AvailableNegative2547668 - 254896948558.1
cofactor-independent phosphoglycerate mutaseDXB63_09500Not AvailableNegative2548976 - 255018444672.8
bifunctional aspartate kinase/homoserine dehydrogenase iDXB63_09505Not AvailableNegative2550189 - 255262188128.1
type i asparaginaseDXB63_09510Not AvailablePositive2553039 - 255408238574.3
dna repair protein radaDXB63_09515Not AvailablePositive2554243 - 255561049918.6
fad-binding proteinDXB63_09520Not AvailablePositive2555623 - 255717957407.9
helix-turn-helix transcriptional regulatorDXB63_09525Not AvailablePositive2557187 - 255776521604.5

Displaying genes 1881 – 1890 of 3500 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.