Agathobacter rectalis strain OM07-13

Gram-positiveRodNon-motileAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Agathobacter

Description

Agathobacter rectalis strain OM07-13 is a Gram-positive, rod-shaped bacterium that is classified as a chemoheterotroph and exhibits anaerobic metabolism. This strain is non-motile and does not possess flagella, which is consistent with its adaptation to an anaerobic environment. It thrives optimally at 37°C, falling within the mesophilic temperature range, indicating its preference for moderate temperature conditions. This bacterium has a single replicon and a single membrane, characteristics that are typical of many prokaryotic organisms. Agathobacter rectalis strain OM07-13 is free-living and has been associated with Homo sapiens, suggesting a potential role in the human microbiome. Its inability to sporulate may reflect a lifestyle that relies on stable anaerobic environments rather than resilience to extreme conditions. The presence of Agathobacter rectalis in the human gut microbiome could have important ecological implications, contributing to the complex interactions within this environment. As a free-living anaerobe, it may participate in various metabolic processes that influence gut health and homeostasis. Understanding the specific roles and interactions of this strain could provide insights into its contributions to human health and the overall dynamics of the gut microbiota. The accession number for this strain is QSTP00000000.1, which may aid in further research and classification.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusAgathobacter
SpeciesAgathobacter rectalis
Strainstrain OM07-13

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Agathobacter rectalis strain OM07-13
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Agathobacter rectalis strain OM07-13 OM07-13.Scaf74, whole genome

Gene Summary

Adenine Count

1143517 bp

Thymine Count

1134508 bp

Guanine Count

776367 bp

Cytosine Count

753775 bp

Genome Length

3808347 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
replication proteinDXB99_18500Not AvailableNegative3641920 - 364265428040.3
hypothetical proteinDXB99_18505Not AvailableNegative3642767 - 364316515251.6
type ii toxin-antitoxin system relb/dinj family antitoxinDXB99_18510Not AvailablePositive3643292 - 364357010248.2
type ii toxin-antitoxin system yafq family toxinDXB99_18515Not AvailablePositive3643567 - 364385711113.5
conjugal transfer protein traaDXB99_18520Not AvailableNegative3643935 - 364538055073.5
duf3847 domain-containing proteinDXB99_18525Not AvailableNegative3645567 - 364585710947.3
sigma-70 family rna polymerase sigma factorDXB99_18530Not AvailableNegative3645886 - 364634718036.9
rna polymerase subunit sigma-24DXB99_18535Not AvailableNegative3646358 - 364681017960.4
sigma-70 family rna polymerase sigma factorDXB99_18540Not AvailableNegative3646914 - 364732715950.9
abc transporter permeaseDXB99_18545Not AvailableNegative3647797 - 364856729023.6

Displaying genes 3571 – 3580 of 3778 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.