Agathobacter rectalis strain OM07-13

Gram-positiveRodNon-motileAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Agathobacter

Description

Agathobacter rectalis strain OM07-13 is a Gram-positive, rod-shaped bacterium that is classified as a chemoheterotroph and exhibits anaerobic metabolism. This strain is non-motile and does not possess flagella, which is consistent with its adaptation to an anaerobic environment. It thrives optimally at 37°C, falling within the mesophilic temperature range, indicating its preference for moderate temperature conditions. This bacterium has a single replicon and a single membrane, characteristics that are typical of many prokaryotic organisms. Agathobacter rectalis strain OM07-13 is free-living and has been associated with Homo sapiens, suggesting a potential role in the human microbiome. Its inability to sporulate may reflect a lifestyle that relies on stable anaerobic environments rather than resilience to extreme conditions. The presence of Agathobacter rectalis in the human gut microbiome could have important ecological implications, contributing to the complex interactions within this environment. As a free-living anaerobe, it may participate in various metabolic processes that influence gut health and homeostasis. Understanding the specific roles and interactions of this strain could provide insights into its contributions to human health and the overall dynamics of the gut microbiota. The accession number for this strain is QSTP00000000.1, which may aid in further research and classification.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusAgathobacter
SpeciesAgathobacter rectalis
Strainstrain OM07-13

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Agathobacter rectalis strain OM07-13
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Agathobacter rectalis strain OM07-13 OM07-13.Scaf74, whole genome

Gene Summary

Adenine Count

1143517 bp

Thymine Count

1134508 bp

Guanine Count

776367 bp

Cytosine Count

753775 bp

Genome Length

3808347 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
thiamine diphosphokinaseDXB99_15580Not AvailableNegative3079495 - 308013923656.2
ribulose-phosphate 3-epimeraseDXB99_15585Not AvailableNegative3080216 - 308094726520.4
ribosome small subunit-dependent gtpase aDXB99_15590Not AvailableNegative3080895 - 308180334257.1
stk1 family pasta domain-containing ser/thr kinaseDXB99_15595Not AvailableNegative3082332 - 308448277084.8
stp1/irep family pp2c-type ser/thr phosphataseDXB99_15600Not AvailableNegative3084499 - 308522726447.4
23s rrna (adenine(2503)-c(2))-methyltransferase rlmnDXB99_15605Not AvailableNegative3085228 - 308629240039.4
16s rrna (cytosine(967)-c(5))-methyltransferase rsmbDXB99_15610Not AvailableNegative3086476 - 308778649140.1
peptidaseDXB99_15615Not AvailableNegative3088060 - 308876425471.3
methionyl-trna formyltransferaseDXB99_15620Not AvailableNegative3088834 - 308976634135.1
peptide deformylaseDXB99_15625Not AvailableNegative3089821 - 309029717411.9

Displaying genes 3031 – 3040 of 3778 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.