Agathobacter rectalis strain OM07-13

Gram-positiveRodNon-motileAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Agathobacter

Description

Agathobacter rectalis strain OM07-13 is a Gram-positive, rod-shaped bacterium that is classified as a chemoheterotroph and exhibits anaerobic metabolism. This strain is non-motile and does not possess flagella, which is consistent with its adaptation to an anaerobic environment. It thrives optimally at 37°C, falling within the mesophilic temperature range, indicating its preference for moderate temperature conditions. This bacterium has a single replicon and a single membrane, characteristics that are typical of many prokaryotic organisms. Agathobacter rectalis strain OM07-13 is free-living and has been associated with Homo sapiens, suggesting a potential role in the human microbiome. Its inability to sporulate may reflect a lifestyle that relies on stable anaerobic environments rather than resilience to extreme conditions. The presence of Agathobacter rectalis in the human gut microbiome could have important ecological implications, contributing to the complex interactions within this environment. As a free-living anaerobe, it may participate in various metabolic processes that influence gut health and homeostasis. Understanding the specific roles and interactions of this strain could provide insights into its contributions to human health and the overall dynamics of the gut microbiota. The accession number for this strain is QSTP00000000.1, which may aid in further research and classification.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusAgathobacter
SpeciesAgathobacter rectalis
Strainstrain OM07-13

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Agathobacter rectalis strain OM07-13
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Agathobacter rectalis strain OM07-13 OM07-13.Scaf74, whole genome

Gene Summary

Adenine Count

1143517 bp

Thymine Count

1134508 bp

Guanine Count

776367 bp

Cytosine Count

753775 bp

Genome Length

3808347 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
enoyl-[acyl-carrier-protein] reductase fabkDXB99_07575Not AvailablePositive1449659 - 145056731790.9
[acyl-carrier-protein] s-malonyltransferaseDXB99_07580Not AvailablePositive1450661 - 145158733112.8
3-oxoacyl-[acyl-carrier-protein] reductaseDXB99_07585Not AvailablePositive1451574 - 145231425698.9
beta-ketoacyl-[acyl-carrier-protein] synthase iiDXB99_07590Not AvailablePositive1452311 - 145354343575.6
3-hydroxyacyl-[acyl-carrier-protein] dehydratase fabzDXB99_07595Not AvailablePositive1453882 - 145431015317.0
acetyl-coa carboxylase carboxyltransferase subunit betaDXB99_07600Not AvailablePositive1454325 - 145609465865.4
ketoacyl-acp synthase iiiDXB99_07605Not AvailablePositive1456113 - 145708133974.4
marr family transcriptional regulatorDXB99_07610Not AvailablePositive1457094 - 145758818861.3
nadp-specific glutamate dehydrogenaseDXB99_07615Not AvailablePositive1457698 - 145905648846.1
zf-hc2 domain-containing proteinDXB99_07620Not AvailableNegative1459156 - 146016337021.0

Displaying genes 1501 – 1510 of 3778 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.