Bacteroides sp. OM08-11

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides sp. OM08-11 is a rod-shaped bacterium characterized by the presence of flagella, which likely contributes to its motility. This species is notable for its genomic organization, containing a single replicon, a feature that can influence its replication and stability within its environment. The genomic data for Bacteroides sp. OM08-11 is cataloged under the accession number QSTJ00000000.1. The presence of flagella indicates that Bacteroides sp. OM08-11 may have enhanced capabilities for movement in its habitat, which could be a critical factor for its survival and ecological interactions, such as colonization of specific niches in the microbiome. The rod shape is a common morphological trait in many bacteria, allowing for efficient nutrient absorption and adaptability in various environments. Understanding the characteristics of Bacteroides sp. OM08-11 can provide insights into its role within microbial communities, particularly in relation to its potential functions in the gut microbiome. Members of the Bacteroides genus are often involved in the degradation of complex carbohydrates and contribute to the overall health of their hosts by participating in metabolic processes. Thus, studying Bacteroides sp. OM08-11 may enhance our knowledge of its ecological significance and functional roles in microbial ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides sp. OM08-11
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides sp. OM08-11 OM08-11.Scaf22, whole genome shotgun

Gene Summary

Adenine Count

1123438 bp

Thymine Count

1150249 bp

Guanine Count

819409 bp

Cytosine Count

785472 bp

Genome Length

3878769 bp

Protein-coding Genes

3094 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-dependent dethiobiotin synthetase biodDXC10_13765Not AvailablePositive3337629 - 333827624434.3
glycosyltransferaseDXC10_13770Not AvailablePositive3338361 - 333953346011.6
abc transporter permeaseDXC10_13775Not AvailableNegative3339673 - 334091746801.1
pyridoxal phosphate-dependent aminotransferaseDXC10_13780Not AvailableNegative3340923 - 334212244777.8
fucose isomeraseDXC10_13785Not AvailablePositive3342348 - 334358345885.7
histidine kinaseDXC10_13790Not AvailableNegative3343594 - 334620099379.5
arylsulfataseDXC10_13795Not AvailableNegative3346482 - 334803557232.5
carbohydrate-binding proteinDXC10_13800Not AvailableNegative3348076 - 3350895104449.0
duf1735 domain-containing proteinDXC10_13805Not AvailableNegative3351003 - 335232848798.9
ragb/susd family nutrient uptake outer membrane proteinDXC10_13810Not AvailableNegative3352366 - 335430073675.2

Displaying genes 2681 – 2690 of 3160 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.