Bacteroides sp. OM08-11

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides sp. OM08-11 is a rod-shaped bacterium characterized by the presence of flagella, which likely contributes to its motility. This species is notable for its genomic organization, containing a single replicon, a feature that can influence its replication and stability within its environment. The genomic data for Bacteroides sp. OM08-11 is cataloged under the accession number QSTJ00000000.1. The presence of flagella indicates that Bacteroides sp. OM08-11 may have enhanced capabilities for movement in its habitat, which could be a critical factor for its survival and ecological interactions, such as colonization of specific niches in the microbiome. The rod shape is a common morphological trait in many bacteria, allowing for efficient nutrient absorption and adaptability in various environments. Understanding the characteristics of Bacteroides sp. OM08-11 can provide insights into its role within microbial communities, particularly in relation to its potential functions in the gut microbiome. Members of the Bacteroides genus are often involved in the degradation of complex carbohydrates and contribute to the overall health of their hosts by participating in metabolic processes. Thus, studying Bacteroides sp. OM08-11 may enhance our knowledge of its ecological significance and functional roles in microbial ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides sp. OM08-11
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides sp. OM08-11 OM08-11.Scaf22, whole genome shotgun

Gene Summary

Adenine Count

1123438 bp

Thymine Count

1150249 bp

Guanine Count

819409 bp

Cytosine Count

785472 bp

Genome Length

3878769 bp

Protein-coding Genes

3094 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hd domain-containing proteinDXC10_07585Not AvailablePositive1912174 - 191271020540.5
lps-assembly protein lptdDXC10_07590Not AvailablePositive1912791 - 1915583105293.0
uracil-dna glycosylaseDXC10_07595Not AvailableNegative1915619 - 191628125010.8
aspartate--ammonia ligaseDXC10_07600Not AvailableNegative1916410 - 191744739959.6
Trna-argNot AvailableNot AvailablePositive1917664 - 1917739Not Available
had family hydrolaseDXC10_07610Not AvailableNegative1917895 - 191863527421.0
glucose-6-phosphate isomeraseDXC10_07615Not AvailableNegative1918767 - 192010448772.4
nad(p)h-dependent glycerol-3-phosphate dehydrogenaseDXC10_07620Not AvailableNegative1920153 - 192114837112.1
lysine--trna ligaseDXC10_07625Not AvailableNegative1921245 - 192297565983.7
mate family efflux transporterDXC10_07630Not AvailablePositive1923440 - 192478948870.6

Displaying genes 1481 – 1490 of 3160 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.