Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DXC16_05005 | Not Available | Negative | 1096439 - 1099714 | 121669.0 |
| Trna-arg | Not Available | Not Available | Positive | 1100023 - 1100097 | Not Available |
| aspartate--ammonia ligase | DXC16_05015 | Not Available | Positive | 1100300 - 1101340 | 39770.2 |
| uracil-dna glycosylase | DXC16_05020 | Not Available | Positive | 1101458 - 1102120 | 24957.5 |
| lps-assembly protein lptd | DXC16_05025 | Not Available | Negative | 1102197 - 1104932 | 103895.0 |
| hdig domain-containing protein | DXC16_05030 | Not Available | Negative | 1105023 - 1105559 | 20311.5 |
| duf1343 domain-containing protein | DXC16_05035 | Not Available | Positive | 1105613 - 1106773 | 43609.9 |
| hypothetical protein | DXC16_05045 | Not Available | Positive | 1107505 - 1107930 | 16855.7 |
| frg domain-containing protein | DXC16_05050 | Not Available | Positive | 1108267 - 1109751 | 57470.5 |
| hypothetical protein | DXC16_05055 | Not Available | Positive | 1110083 - 1110472 | 14839.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

