Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 92 protein | DXC16_04955 | Not Available | Negative | 1077828 - 1080080 | 85450.5 |
| beta-n-acetylhexosaminidase | DXC16_04960 | Not Available | Negative | 1080107 - 1082161 | 77096.7 |
| cyclically-permuted mutarotase family protein | DXC16_04965 | Not Available | Negative | 1082158 - 1083285 | 40509.5 |
| beta-n-acetylhexosaminidase | DXC16_04970 | Not Available | Negative | 1083472 - 1085796 | 86341.0 |
| glycoside hydrolase family 2 protein | DXC16_04975 | Not Available | Negative | 1085813 - 1088380 | 98692.7 |
| sialate o-acetylesterase | DXC16_04980 | Not Available | Negative | 1088407 - 1090470 | 77630.1 |
| sialate o-acetylesterase | DXC16_04985 | Not Available | Negative | 1090467 - 1091132 | 25131.8 |
| beta-n-acetylhexosaminidase | DXC16_04990 | Not Available | Negative | 1091134 - 1093140 | 77164.5 |
| sialidase | DXC16_04995 | Not Available | Negative | 1093144 - 1094784 | 60315.2 |
| susd family outer membrane lipoprotein nanu | DXC16_05000 | Not Available | Negative | 1094917 - 1096419 | 57012.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

