Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_04905 | Not Available | Negative | 1065147 - 1065266 | 4138.87 |
| hypothetical protein | DXC16_04910 | Not Available | Positive | 1065586 - 1066257 | 25597.6 |
| hypothetical protein | DXC16_04915 | Not Available | Positive | 1066395 - 1067324 | 35547.2 |
| atp-binding cassette domain-containing protein | DXC16_04920 | Not Available | Positive | 1067321 - 1067998 | 25555.1 |
| carboxypeptidase-like regulatory domain-containing protein | DXC16_04925 | Not Available | Negative | 1068055 - 1070715 | 102324.0 |
| glpgli family protein | DXC16_04930 | Not Available | Negative | 1070720 - 1071586 | 32859.3 |
| sensor histidine kinase | DXC16_04935 | Not Available | Positive | 1071757 - 1073190 | 55051.1 |
| dna-binding response regulator | DXC16_04940 | Not Available | Positive | 1073213 - 1073914 | 26867.4 |
| n-acetylglucosamine-6-phosphate deacetylase | DXC16_04945 | Not Available | Negative | 1073983 - 1075146 | 42239.2 |
| duf4982 domain-containing protein | DXC16_04950 | Not Available | Negative | 1075321 - 1077825 | 94032.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

