Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acylglucosamine 2-epimerase | DXC16_04855 | Not Available | Positive | 1051318 - 1052514 | 46187.0 |
| mfs transporter | DXC16_04860 | Not Available | Positive | 1052533 - 1053768 | 44685.5 |
| glucosamine-6-phosphate deaminase | DXC16_04865 | Not Available | Positive | 1053814 - 1054605 | 29021.6 |
| glucosamine-6-phosphate deaminase | DXC16_04870 | Not Available | Positive | 1054609 - 1056597 | 74771.3 |
| tigr02757 family protein | DXC16_04875 | Not Available | Negative | 1056773 - 1057537 | 29949.8 |
| arac family transcriptional regulator | DXC16_04880 | Not Available | Negative | 1057603 - 1058481 | 34389.8 |
| efflux rnd transporter periplasmic adaptor subunit | DXC16_04885 | Not Available | Positive | 1058658 - 1059725 | 39287.3 |
| acrb/acrd/acrf family protein | DXC16_04890 | Not Available | Positive | 1059725 - 1062850 | 115863.0 |
| tolc family protein | DXC16_04895 | Not Available | Positive | 1062883 - 1064262 | 51571.1 |
| dna-binding protein | DXC16_04900 | Not Available | Negative | 1064477 - 1065181 | 27007.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

