Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h-dependent glycerol-3-phosphate dehydrogenase | DXC16_04805 | Not Available | Positive | 1036740 - 1037735 | 37117.2 |
| glucose-6-phosphate isomerase | DXC16_04810 | Not Available | Positive | 1037749 - 1039092 | 49105.9 |
| had family hydrolase | DXC16_04815 | Not Available | Positive | 1039242 - 1039976 | 27115.4 |
| hypothetical protein | DXC16_04820 | Not Available | Negative | 1040089 - 1041333 | 47191.8 |
| ragb/susd family nutrient uptake outer membrane protein | DXC16_04825 | Not Available | Negative | 1041346 - 1042935 | 60787.8 |
| susc/raga family tonb-linked outer membrane protein | DXC16_04830 | Not Available | Negative | 1042951 - 1046688 | 139679.0 |
| duf4974 domain-containing protein | DXC16_04835 | Not Available | Negative | 1046836 - 1047918 | 41137.3 |
| sigma-70 family rna polymerase sigma factor | DXC16_04840 | Not Available | Negative | 1048131 - 1048766 | 24920.2 |
| rok family transcriptional regulator | DXC16_04845 | Not Available | Negative | 1048879 - 1050084 | 44559.1 |
| n-acetylneuraminate lyase | DXC16_04850 | Not Available | Positive | 1050391 - 1051305 | 33926.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

