Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| siderophore biosynthesis protein | DXC16_04755 | Not Available | Negative | 1026679 - 1027305 | 24514.3 |
| gliding motility-associated protein glde | DXC16_04760 | Not Available | Negative | 1027314 - 1028666 | 50843.5 |
| single-stranded dna-binding protein | DXC16_04765 | Not Available | Negative | 1028703 - 1029170 | 17289.3 |
| a/g-specific adenine glycosylase | DXC16_04770 | Not Available | Negative | 1029185 - 1030243 | 40541.6 |
| integration host factor subunit beta | DXC16_04775 | Not Available | Positive | 1030423 - 1030698 | 10172.4 |
| ribonuclease e/g | DXC16_04780 | Not Available | Positive | 1030937 - 1032511 | 59703.8 |
| n-acetylmuramoyl-l-alanine amidase | DXC16_04785 | Not Available | Negative | 1032683 - 1033489 | 30760.1 |
| tlpa family protein disulfide reductase | DXC16_04790 | Not Available | Negative | 1033496 - 1034038 | 20293.0 |
| hypothetical protein | DXC16_04795 | Not Available | Positive | 1034270 - 1034878 | 23097.2 |
| lysine--trna ligase | DXC16_04800 | Not Available | Positive | 1034953 - 1036683 | 66493.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

