Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_04700 | Not Available | Negative | 1019283 - 1019504 | 8704.04 |
| arsr family transcriptional regulator | DXC16_04705 | Not Available | Negative | 1019494 - 1019694 | 7270.89 |
| Trna-undet | Not Available | Not Available | Positive | 1019718 - 1019803 | Not Available |
| hypothetical protein | DXC16_04715 | Not Available | Negative | 1019814 - 1020005 | 7441.04 |
| xre family transcriptional regulator | DXC16_04720 | Not Available | Positive | 1020141 - 1020560 | 15781.9 |
| hypothetical protein | DXC16_04725 | Not Available | Negative | 1020671 - 1020892 | 8912.93 |
| hypothetical protein | DXC16_04730 | Not Available | Negative | 1020960 - 1021172 | 7893.87 |
| type i asparaginase | DXC16_04740 | Not Available | Positive | 1022478 - 1023521 | 38728.6 |
| dna-binding response regulator | DXC16_04745 | Not Available | Positive | 1023718 - 1024407 | 26203.9 |
| two-component sensor histidine kinase | DXC16_04750 | Not Available | Positive | 1024426 - 1026207 | 68710.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

