Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminodeoxychorismate/anthranilate synthase component ii | DXC16_04455 | Not Available | Positive | 975517 - 976107 | 21686.1 |
| anthranilate phosphoribosyltransferase | DXC16_04460 | Not Available | Positive | 976129 - 977124 | 36484.2 |
| indole-3-glycerol phosphate synthase trpc | DXC16_04465 | Not Available | Positive | 977163 - 977951 | 29292.5 |
| phosphoribosylanthranilate isomerase | DXC16_04470 | Not Available | Positive | 977964 - 978581 | 22880.5 |
| dna adenine methylase | DXC16_04485 | Not Available | Negative | 978940 - 979794 | 32802.6 |
| thymidylate synthase | DXC16_04490 | Not Available | Negative | 979890 - 980534 | 24410.4 |
| hypothetical protein | DXC16_04495 | Not Available | Negative | 980607 - 980849 | 9290.32 |
| hypothetical protein | DXC16_04500 | Not Available | Negative | 981029 - 981514 | 18871.1 |
| hypothetical protein | DXC16_04505 | Not Available | Negative | 981511 - 982815 | 50442.9 |
| hypothetical protein | DXC16_04520 | Not Available | Negative | 983331 - 990050 | 242841.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

