Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_02255 | Not Available | Positive | 474000 - 474179 | 7375.98 |
| 1_nc_021804: hypothetical protein | DXC16_02260 | Not Available | Positive | 474234 - 474599 | 14013.8 |
| Putative tape measure domain protein | DXC16_04540 | Not Available | Negative | 994628 - 999019 | 162886.0 |
| Hypothetical protein | DXC16_04545 | Not Available | Negative | 999020 - 999220 | 7360.65 |
| hypothetical protein | DXC16_04550 | Not Available | Negative | 999259 - 999750 | 18742.3 |
| hypothetical protein | DXC16_04555 | Not Available | Negative | 999754 - 1000329 | 20567.4 |
| hypothetical protein | DXC16_04560 | Not Available | Negative | 1000326 - 1000673 | 12500.0 |
| hypothetical protein | DXC16_04565 | Not Available | Negative | 1000615 - 1001094 | 17515.8 |
| Hypothetical protein | DXC16_04570 | Not Available | Negative | 1001122 - 1001508 | 13689.0 |
| N-acetylmuramoyl-l-alanine amidase | DXC16_04575 | Not Available | Negative | 1001521 - 1001985 | 17191.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

