Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tolc family protein | DXC16_04405 | Not Available | Negative | 961813 - 963105 | 48422.8 |
| acrb/acrd/acrf family protein | DXC16_04410 | Not Available | Negative | 963105 - 966152 | 112590.0 |
| efflux rnd transporter periplasmic adaptor subunit | DXC16_04415 | Not Available | Negative | 966171 - 967226 | 38693.3 |
| arac family transcriptional regulator | DXC16_04420 | Not Available | Positive | 967390 - 968235 | 32523.8 |
| s9 family peptidase | DXC16_04425 | Not Available | Negative | 968338 - 970788 | 91460.3 |
| duf4891 domain-containing protein | DXC16_04430 | Not Available | Negative | 970877 - 971275 | 14987.3 |
| duf308 domain-containing protein | DXC16_04435 | Not Available | Negative | 971286 - 971852 | 20327.0 |
| ytxh domain-containing protein | DXC16_04440 | Not Available | Positive | 972333 - 972593 | 9298.01 |
| tryptophan synthase subunit beta | DXC16_04445 | Not Available | Positive | 972844 - 974043 | 43987.0 |
| anthranilate synthase component i family protein | DXC16_04450 | Not Available | Positive | 974104 - 975504 | 52825.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

