Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4fe-4s ferredoxin | DXC16_04300 | Not Available | Negative | 938532 - 939311 | 29051.1 |
| 50s ribosomal protein l20 | DXC16_04305 | Not Available | Negative | 939776 - 940126 | 13181.3 |
| 50s ribosomal protein l35 | DXC16_04310 | Not Available | Negative | 940238 - 940435 | 7367.31 |
| translation initiation factor if-3 | DXC16_04315 | Not Available | Negative | 940507 - 941103 | 22643.4 |
| threonine--trna ligase | DXC16_04320 | Not Available | Negative | 941219 - 943159 | 74231.2 |
| tetratricopeptide repeat protein | DXC16_04325 | Not Available | Negative | 943240 - 945249 | 77292.4 |
| peptide deformylase | DXC16_04330 | Not Available | Negative | 945322 - 945876 | 21050.7 |
| holliday junction resolvase ruvx | DXC16_04335 | Not Available | Negative | 945900 - 946319 | 15859.5 |
| hypothetical protein | DXC16_04340 | Not Available | Positive | 946525 - 947763 | 47727.3 |
| duf3869 domain-containing protein | DXC16_04345 | Not Available | Positive | 947774 - 948664 | 31093.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

