Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4fe-4s dicluster domain-containing protein | DXC16_04250 | Not Available | Positive | 925251 - 926717 | 54223.4 |
| [fefe] hydrogenase h-cluster radical sam maturase hyde | DXC16_04255 | Not Available | Positive | 926726 - 927760 | 38858.7 |
| [fefe] hydrogenase h-cluster radical sam maturase hydg | DXC16_04260 | Not Available | Positive | 927773 - 929191 | 53347.0 |
| [fefe] hydrogenase h-cluster maturation gtpase hydf | DXC16_04265 | Not Available | Positive | 929255 - 930445 | 43910.6 |
| transcriptional regulator | DXC16_04270 | Not Available | Negative | 930672 - 930776 | 3785.48 |
| hypothetical protein | DXC16_04275 | Not Available | Negative | 931256 - 933295 | 79741.4 |
| alpha-l-fucosidase | DXC16_04280 | Not Available | Negative | 933314 - 934663 | 51865.6 |
| dna/rna non-specific endonuclease | DXC16_04285 | Not Available | Positive | 934788 - 935645 | 32389.9 |
| alpha-n-arabinofuranosidase | DXC16_04290 | Not Available | Negative | 935735 - 937258 | 57343.5 |
| endolytic transglycosylase mltg | DXC16_04295 | Not Available | Positive | 937459 - 938493 | 39590.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

