Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3795 domain-containing protein | DXC16_04190 | Not Available | Negative | 915934 - 916278 | 13108.9 |
| general stress protein | DXC16_04195 | Not Available | Negative | 916284 - 916964 | 26136.8 |
| hypothetical protein | DXC16_04205 | Not Available | Negative | 917469 - 917672 | 8126.12 |
| glycosyl hydrolase family 109 protein 1 | DXC16_04215 | Not Available | Positive | 918204 - 919619 | 53465.8 |
| carbonic anhydrase | DXC16_04220 | Not Available | Negative | 919743 - 920282 | 19937.5 |
| crp/fnr family transcriptional regulator | DXC16_04225 | Not Available | Negative | 920473 - 921057 | 22223.6 |
| mate family efflux transporter | DXC16_04230 | Not Available | Negative | 921093 - 922445 | 49552.6 |
| Trna-thr | Not Available | Not Available | Positive | 922598 - 922671 | Not Available |
| molecular chaperone groel | DXC16_04240 | Not Available | Negative | 922919 - 924556 | 58147.1 |
| co-chaperone groes | DXC16_04245 | Not Available | Negative | 924598 - 924870 | 9740.92 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

