Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urocanate hydratase | DXC16_04140 | Not Available | Positive | 906806 - 908803 | 74552.1 |
| formiminotransferase-cyclodeaminase | DXC16_04145 | Not Available | Positive | 908825 - 908938 | 4348.15 |
| glutamate formimidoyltransferase | DXC16_04150 | Not Available | Positive | 908886 - 909788 | 33343.4 |
| gxxexxy protein | DXC16_04155 | Not Available | Positive | 909806 - 910192 | 15150.3 |
| imidazolonepropionase | DXC16_04160 | Not Available | Positive | 910239 - 911483 | 44933.3 |
| methenyltetrahydrofolate cyclohydrolase | DXC16_04165 | Not Available | Positive | 911504 - 912127 | 22967.8 |
| histidine ammonia-lyase | DXC16_04170 | Not Available | Positive | 912162 - 913658 | 55193.9 |
| nudix domain-containing protein | DXC16_04175 | Not Available | Positive | 913777 - 914277 | 19000.3 |
| hypothetical protein | DXC16_04180 | Not Available | Negative | 915005 - 915211 | 7690.22 |
| glutamine amidotransferase | DXC16_04185 | Not Available | Negative | 915314 - 915931 | 22787.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

