Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_04090 | Not Available | Negative | 896515 - 897579 | 40208.2 |
| hypothetical protein | DXC16_04095 | Not Available | Negative | 897658 - 897918 | 9561.44 |
| electron transfer flavoprotein beta subunit/fixa family protein | DXC16_04100 | Not Available | Positive | 898285 - 899178 | 31873.2 |
| electron transfer flavoprotein subunit alpha/fixb family protein | DXC16_04105 | Not Available | Positive | 899184 - 900203 | 36698.3 |
| four helix bundle protein | DXC16_04110 | Not Available | Positive | 900239 - 900619 | 14337.4 |
| acyl-coa dehydrogenase | DXC16_04115 | Not Available | Positive | 900661 - 902367 | 63864.0 |
| histidine decarboxylase | DXC16_04120 | Not Available | Positive | 902826 - 903434 | 22182.6 |
| paai family thioesterase | DXC16_04125 | Not Available | Negative | 903514 - 903924 | 14751.8 |
| duf2027 domain-containing protein | DXC16_04130 | Not Available | Negative | 903952 - 905040 | 41096.4 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | DXC16_04135 | Not Available | Positive | 905105 - 906322 | 46274.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

