Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | DXC16_03925 | Not Available | Negative | 851144 - 852778 | 61961.7 |
| putative transporter | DXC16_03930 | Not Available | Negative | 852894 - 854564 | 60144.9 |
| methylmalonyl-coa mutase small subunit | DXC16_03935 | Not Available | Positive | 854850 - 856760 | 70522.5 |
| methylmalonyl-coa mutase | DXC16_03940 | Not Available | Positive | 856770 - 858920 | 79111.7 |
| ragb/susd family nutrient uptake outer membrane protein | DXC16_03945 | Not Available | Negative | 859243 - 860733 | 55870.6 |
| tonb-dependent receptor | DXC16_03950 | Not Available | Negative | 860747 - 863992 | 119608.0 |
| duf1232 domain-containing protein | DXC16_03955 | Not Available | Negative | 864499 - 864861 | 13900.1 |
| tonb-dependent receptor | DXC16_03960 | Not Available | Negative | 865006 - 867330 | 88462.1 |
| sensor histidine kinase | DXC16_03965 | Not Available | Positive | 867486 - 868982 | 56829.7 |
| mechanosensitive ion channel family protein | DXC16_03970 | Not Available | Negative | 869101 - 870294 | 45202.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

