Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_03825 | Not Available | Positive | 821546 - 822460 | 35465.8 |
| peptidase domain-containing abc transporter | DXC16_03830 | Not Available | Positive | 822457 - 824649 | 83177.2 |
| hlyd family efflux transporter periplasmic adaptor subunit | DXC16_03835 | Not Available | Positive | 824698 - 825843 | 43737.3 |
| hypothetical protein | DXC16_03840 | Not Available | Positive | 825892 - 826095 | 7562.53 |
| radical sam protein | DXC16_03845 | Not Available | Positive | 826073 - 827584 | 58122.2 |
| peptidase c39 | DXC16_03850 | Not Available | Positive | 827577 - 828158 | 23420.5 |
| hypothetical protein | DXC16_03855 | Not Available | Negative | 828124 - 828747 | 23147.9 |
| hypothetical protein | DXC16_03860 | Not Available | Positive | 829060 - 829281 | 8421.99 |
| hypothetical protein | DXC16_03865 | Not Available | Positive | 829278 - 829499 | 8538.35 |
| rna degradosome polyphosphate kinase | DXC16_03870 | Not Available | Negative | 829525 - 831579 | 80461.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

