Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3244 domain-containing protein | DXC16_03775 | Not Available | Positive | 807375 - 807779 | 14848.9 |
| hypothetical protein | DXC16_03780 | Not Available | Positive | 807923 - 808849 | 35832.6 |
| peptidase c39 | DXC16_03785 | Not Available | Positive | 808970 - 809557 | 23231.6 |
| tonb-dependent receptor | DXC16_03790 | Not Available | Negative | 809575 - 811881 | 86903.2 |
| hypothetical protein | DXC16_03795 | Not Available | Negative | 811911 - 814220 | 87809.4 |
| tonb-dependent receptor | DXC16_03800 | Not Available | Negative | 814422 - 816752 | 87875.5 |
| radical sam protein | DXC16_03805 | Not Available | Negative | 816770 - 818095 | 51761.6 |
| tetratricopeptide repeat protein | DXC16_03810 | Not Available | Positive | 818779 - 820662 | 73819.4 |
| duf3244 domain-containing protein | DXC16_03815 | Not Available | Positive | 820826 - 821239 | 15321.3 |
| hypothetical protein | DXC16_03820 | Not Available | Positive | 821274 - 821513 | 9362.56 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

