Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mrp family atp-binding protein | DXC16_03725 | Not Available | Negative | 796227 - 797327 | 39559.0 |
| trna (guanosine(46)-n7)-methyltransferase trmb | DXC16_03730 | Not Available | Negative | 797338 - 798096 | 29773.6 |
| duf975 family protein | DXC16_03735 | Not Available | Negative | 798219 - 798845 | 23245.0 |
| branched-chain amino acid aminotransferase | DXC16_03740 | Not Available | Negative | 798863 - 799882 | 37876.2 |
| exodeoxyribonuclease vii small subunit | DXC16_03745 | Not Available | Negative | 800063 - 800266 | 7823.46 |
| exodeoxyribonuclease vii large subunit | DXC16_03750 | Not Available | Negative | 800275 - 801582 | 49535.8 |
| serine protease | DXC16_03755 | Not Available | Negative | 801582 - 802955 | 49946.9 |
| mate family efflux transporter | DXC16_03760 | Not Available | Positive | 803077 - 804447 | 49490.1 |
| cytidylate kinase-like family protein | DXC16_03765 | Not Available | Positive | 804501 - 805130 | 23564.2 |
| hypothetical protein | DXC16_03770 | Not Available | Positive | 805360 - 807216 | 72886.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

