Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chromosome partitioning protein parb | DXC16_03670 | Not Available | Positive | 783742 - 784254 | 19744.9 |
| hypothetical protein | DXC16_03675 | Not Available | Positive | 784282 - 786066 | 65216.7 |
| malate dehydrogenase | DXC16_03680 | Not Available | Negative | 786164 - 787105 | 32849.0 |
| hypothetical protein | DXC16_03685 | Not Available | Positive | 787262 - 788134 | 33451.4 |
| tolc family protein | DXC16_03690 | Not Available | Positive | 788349 - 789812 | 53464.7 |
| biotin/lipoyl-binding protein | DXC16_03695 | Not Available | Positive | 789839 - 790825 | 35945.9 |
| abc transporter permease | DXC16_03700 | Not Available | Positive | 790832 - 792007 | 44227.0 |
| abc transporter permease | DXC16_03705 | Not Available | Positive | 792022 - 793272 | 47511.7 |
| blai/meci/copy family transcriptional regulator | DXC16_03715 | Not Available | Positive | 793921 - 794286 | 14087.0 |
| tonb family protein | DXC16_03720 | Not Available | Positive | 794309 - 796159 | 69497.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

