Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_03620 | Not Available | Positive | 770838 - 771020 | 6713.74 |
| nadp-specific glutamate dehydrogenase | DXC16_03625 | Not Available | Positive | 771176 - 772510 | 48972.7 |
| hypothetical protein | DXC16_03630 | Not Available | Positive | 772736 - 773881 | 42204.5 |
| port family protein | DXC16_03635 | Not Available | Positive | 773913 - 774689 | 29308.0 |
| duf4925 domain-containing protein | DXC16_03640 | Not Available | Negative | 775562 - 776713 | 41448.2 |
| hypothetical protein | DXC16_03645 | Not Available | Negative | 776797 - 777258 | 16489.8 |
| phosphoenolpyruvate synthase | DXC16_03650 | Not Available | Negative | 777368 - 780325 | 112937.0 |
| nadp-specific glutamate dehydrogenase | DXC16_03655 | Not Available | Positive | 780560 - 781897 | 48508.4 |
| hypothetical protein | DXC16_03660 | Not Available | Positive | 782059 - 782451 | 15101.9 |
| duf3440 domain-containing protein | DXC16_03665 | Not Available | Positive | 782444 - 783745 | 52326.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

