Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_03565 | Not Available | Negative | 753088 - 754455 | 50804.9 |
| hypothetical protein | DXC16_03570 | Not Available | Negative | 754592 - 754885 | 11224.5 |
| acrb/acrd/acrf family protein | DXC16_03575 | Not Available | Negative | 754958 - 758128 | 115941.0 |
| efflux rnd transporter periplasmic adaptor subunit | DXC16_03580 | Not Available | Negative | 758210 - 759232 | 37701.0 |
| tetr/acrr family transcriptional regulator | DXC16_03590 | Not Available | Negative | 760619 - 761272 | 25440.8 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | DXC16_03595 | Not Available | Negative | 761302 - 762069 | 27537.9 |
| tolc family protein | DXC16_03600 | Not Available | Negative | 762093 - 763478 | 50381.3 |
| hydrophobe/amphiphile efflux-1 family rnd transporter | DXC16_03605 | Not Available | Negative | 763490 - 766708 | 116875.0 |
| efflux rnd transporter periplasmic adaptor subunit | DXC16_03610 | Not Available | Negative | 766761 - 767972 | 43695.5 |
| nadp-dependent malic enzyme | DXC16_03615 | Not Available | Positive | 768424 - 770709 | 84255.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

