Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor | DXC16_03460 | Not Available | Negative | 728546 - 729091 | 21382.9 |
| susc/raga family tonb-linked outer membrane protein | DXC16_03465 | Not Available | Positive | 729412 - 732453 | 112156.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DXC16_03470 | Not Available | Positive | 732453 - 734156 | 63029.3 |
| rna polymerase sigma-70 factor | DXC16_03475 | Not Available | Positive | 734402 - 734911 | 19967.9 |
| fecr family protein | DXC16_03480 | Not Available | Positive | 734981 - 735784 | 30911.8 |
| tonb-dependent receptor | DXC16_03485 | Not Available | Positive | 735781 - 738435 | 100786.0 |
| duf4249 domain-containing protein | DXC16_03490 | Not Available | Positive | 738442 - 739407 | 36370.1 |
| 4-phosphoerythronate dehydrogenase pdxb | DXC16_03495 | Not Available | Negative | 739572 - 740597 | 38367.9 |
| glycosyltransferase family 9 protein | DXC16_03500 | Not Available | Positive | 740702 - 741733 | 38600.2 |
| acetyltransferase | DXC16_03505 | Not Available | Positive | 741734 - 742657 | 37581.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

