Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_03310 | Not Available | Negative | 684086 - 684340 | 9468.81 |
| tetratricopeptide repeat protein | DXC16_03315 | Not Available | Negative | 684470 - 685984 | 59581.6 |
| outer membrane lipoprotein carrier protein lola | DXC16_03320 | Not Available | Positive | 686757 - 687392 | 24793.4 |
| hypothetical protein | DXC16_03325 | Not Available | Positive | 687367 - 687909 | 20783.8 |
| hydroxymyristoyl-acp dehydratase | DXC16_03330 | Not Available | Positive | 687911 - 688291 | 14362.7 |
| hypothetical protein | DXC16_03335 | Not Available | Positive | 688400 - 688684 | 9684.51 |
| duf4221 domain-containing protein | DXC16_03340 | Not Available | Positive | 688757 - 689941 | 46164.9 |
| duf2062 domain-containing protein | DXC16_03345 | Not Available | Positive | 690063 - 691256 | 44805.9 |
| methyltransferase domain-containing protein | DXC16_03350 | Not Available | Positive | 691249 - 695103 | 146558.0 |
| nad(p)/fad-dependent oxidoreductase | DXC16_03355 | Not Available | Positive | 695096 - 696586 | 56675.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

