Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxymyristoyl-acp dehydratase | DXC16_03210 | Not Available | Positive | 661245 - 661682 | 16452.2 |
| acyl-coa thioesterase | DXC16_03215 | Not Available | Positive | 661679 - 662122 | 17306.7 |
| beta-acp synthase | DXC16_03220 | Not Available | Positive | 662107 - 663837 | 63634.1 |
| acyl carrier protein | DXC16_03225 | Not Available | Positive | 663843 - 664100 | 9574.45 |
| beta-ketoacyl-[acyl-carrier-protein] synthase family protein | DXC16_03230 | Not Available | Positive | 664097 - 665287 | 42136.2 |
| 3-oxoacyl-acp synthase | DXC16_03235 | Not Available | Positive | 665291 - 666253 | 35688.0 |
| kila-n domain-containing protein | DXC16_03240 | Not Available | Positive | 666358 - 667212 | 33282.9 |
| polysaccharide deacetylase family protein | DXC16_03245 | Not Available | Positive | 667263 - 667952 | 26504.0 |
| hypothetical protein | DXC16_03250 | Not Available | Negative | 667983 - 670655 | 102181.0 |
| glpgli family protein | DXC16_03255 | Not Available | Negative | 670597 - 671406 | 32084.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

