Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hu family dna-binding protein | DXC16_03110 | Not Available | Positive | 626230 - 626502 | 9278.25 |
| duf4981 domain-containing protein | DXC16_03115 | Not Available | Positive | 626595 - 629924 | 125947.0 |
| dna-binding protein | DXC16_03120 | Not Available | Positive | 630096 - 630566 | 18252.8 |
| trna 2-thiouridine(34) synthase mnma | DXC16_03125 | Not Available | Positive | 630569 - 631624 | 40157.7 |
| arylsulfatase | DXC16_03130 | Not Available | Positive | 631772 - 633334 | 57611.2 |
| alpha-l-arabinofuranosidase | DXC16_03135 | Not Available | Negative | 634137 - 636116 | 75340.1 |
| arabinan endo-1,5-alpha-l-arabinosidase | DXC16_03140 | Not Available | Negative | 636140 - 637675 | 57814.3 |
| response regulator | DXC16_03145 | Not Available | Positive | 637963 - 642189 | 161250.0 |
| glycoside hydrolase family 97 protein | DXC16_03150 | Not Available | Positive | 642322 - 644250 | 72884.4 |
| tonb-dependent receptor | DXC16_03155 | Not Available | Positive | 644690 - 647899 | 118861.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

