Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-oxoacid:acceptor oxidoreductase subunit alpha | DXC16_03060 | Not Available | Negative | 611914 - 613761 | 66247.6 |
| Trna-arg | Not Available | Not Available | Positive | 614172 - 614246 | Not Available |
| glycine c-acetyltransferase | DXC16_03070 | Not Available | Negative | 614314 - 615504 | 43568.4 |
| nad-dependent epimerase/dehydratase family protein | DXC16_03075 | Not Available | Positive | 615675 - 616628 | 35269.3 |
| sugar kinase | DXC16_03080 | Not Available | Positive | 616776 - 617840 | 38944.4 |
| protein translocase subunit secdf | DXC16_03085 | Not Available | Negative | 618105 - 621092 | 109218.0 |
| m3 family peptidase | DXC16_03090 | Not Available | Negative | 621271 - 623358 | 78974.4 |
| endonuclease | DXC16_03095 | Not Available | Negative | 623385 - 624464 | 40263.8 |
| rhomboid family intramembrane serine protease | DXC16_03100 | Not Available | Negative | 624468 - 625361 | 33974.6 |
| rhomboid family intramembrane serine protease | DXC16_03105 | Not Available | Negative | 625342 - 626019 | 25332.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

