Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyltransferase | DXC16_02960 | Not Available | Positive | 590842 - 591867 | 39504.4 |
| glycosyl transferase | DXC16_02965 | Not Available | Negative | 591890 - 592720 | 31834.5 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | DXC16_02970 | Not Available | Positive | 592810 - 594615 | 70240.4 |
| nad/nadp octopine/nopaline dehydrogenase | DXC16_02975 | Not Available | Positive | 594612 - 595712 | 41186.0 |
| licd family protein | DXC16_02980 | Not Available | Positive | 595716 - 596513 | 31703.4 |
| hemolysin activation protein | DXC16_02985 | Not Available | Positive | 596527 - 597543 | 40411.5 |
| glycosyltransferase | DXC16_02990 | Not Available | Positive | 597516 - 598631 | 42943.4 |
| glycosyltransferase | DXC16_02995 | Not Available | Positive | 598644 - 599906 | 47669.5 |
| glycosyltransferase | DXC16_03000 | Not Available | Positive | 599899 - 600645 | 28692.4 |
| hypothetical protein | DXC16_03005 | Not Available | Negative | 600671 - 603163 | 93052.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

