Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_00630 | Not Available | Positive | 120277 - 120543 | 10276.2 |
| hypothetical protein | DXC16_00635 | Not Available | Positive | 120515 - 120889 | 14116.0 |
| type ii toxin-antitoxin system hicb family antitoxin | DXC16_00640 | Not Available | Negative | 121004 - 121408 | 15491.4 |
| Hypothetical protein | DXC16_00645 | Not Available | Negative | 121465 - 121650 | 7177.73 |
| Attr | Not Available | Not Available | Positive | 134309 - 134322 | Not Available |
| Attl | Not Available | Not Available | Positive | 457979 - 457990 | Not Available |
| Integrase | DXC16_02140 | Not Available | Negative | 458110 - 459339 | 47713.5 |
| hypothetical protein | DXC16_02145 | Not Available | Negative | 459671 - 460009 | 12922.5 |
| lexa family transcriptional regulator | DXC16_02150 | Not Available | Negative | 460011 - 460781 | 28755.6 |
| hypothetical protein | DXC16_02155 | Not Available | Positive | 461556 - 461759 | 7678.17 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

