Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_02810 | Not Available | Positive | 561100 - 561480 | 14324.3 |
| hypothetical protein | DXC16_02815 | Not Available | Positive | 561590 - 561769 | 6621.19 |
| Trna-leu | Not Available | Not Available | Positive | 561748 - 561835 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 561852 - 561924 | Not Available |
| l-glyceraldehyde 3-phosphate reductase | DXC16_02830 | Not Available | Negative | 561995 - 562987 | 36721.9 |
| argininosuccinate lyase | DXC16_02835 | Not Available | Negative | 563011 - 564351 | 50611.4 |
| srpbcc family protein | DXC16_02840 | Not Available | Negative | 564366 - 564770 | 15197.6 |
| orotate phosphoribosyltransferase | DXC16_02845 | Not Available | Negative | 564868 - 565506 | 23412.4 |
| comf family protein | DXC16_02850 | Not Available | Negative | 565606 - 566301 | 26096.9 |
| recx family transcriptional regulator | DXC16_02855 | Not Available | Negative | 566282 - 566767 | 18883.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

