Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yggs family pyridoxal phosphate-dependent enzyme | DXC16_02760 | Not Available | Positive | 546783 - 547451 | 25398.4 |
| dihydroorotate dehydrogenase-like protein | DXC16_02765 | Not Available | Positive | 547465 - 548439 | 35625.3 |
| long-chain fatty acid--coa ligase | DXC16_02770 | Not Available | Positive | 548616 - 550274 | 62504.7 |
| hypothetical protein | DXC16_02775 | Not Available | Positive | 550528 - 551913 | 48513.0 |
| duf3943 domain-containing protein | DXC16_02780 | Not Available | Positive | 551952 - 553424 | 56295.3 |
| crp/fnr family transcriptional regulator | DXC16_02785 | Not Available | Negative | 553421 - 553999 | 22566.6 |
| peptidase | DXC16_02790 | Not Available | Positive | 554142 - 555740 | 60242.0 |
| aminopeptidase | DXC16_02795 | Not Available | Positive | 555772 - 556962 | 45290.6 |
| s9 family peptidase | DXC16_02800 | Not Available | Positive | 557093 - 559324 | 84409.6 |
| hypothetical protein | DXC16_02805 | Not Available | Positive | 559554 - 561041 | 56276.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

